Package: adept 1.3.0

adept: Adaptive Empirical Pattern Transformation

Designed for optimal use in performing fast, accurate walking strides segmentation from high-density data collected from a wearable accelerometer worn during continuous walking activity.

Authors:Marta Karas [aut, cre], Jacek Urbanek [aut], Ciprian Crainiceanu [aut], John Muschelli [ctb], Adi Gherman [ctb]

adept_1.3.0.tar.gz
adept_1.3.0.zip(r-4.7-any)adept_1.3.0.zip(r-4.6-any)adept_1.3.0.zip(r-4.5-any)
adept_1.3.0.tgz(r-4.6-any)adept_1.3.0.tgz(r-4.5-any)
adept_1.3.0.tar.gz(r-4.7-any)adept_1.3.0.tar.gz(r-4.6-any)
adept_1.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
adept/json (API)

# Install 'adept' in R:
install.packages('adept', repos = c('https://martakarass.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/martakarass/adept/issues

On CRAN:

Conda:

5.65 score 7 stars 32 scripts 161 downloads 5 exports 73 dependencies

Last updated from:5ace92d914. Checks:4 OK, 5 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK192
source / vignettesOK330
linux-release-x86_64OK212
macos-release-arm64FAIL140
macos-oldrel-arm64FAIL102
windows-develFAIL69
windows-releaseFAIL66
windows-oldrelFAIL66
wasm-releaseOK169

Exports:scaleTemplatesegmentPatternsegmentWalkingsimilarityMatrixwindowSmooth

Dependencies:assertthatbase64encbslibcachemclicpp11cubaturedata.tableDBIdigestdplyrdvmiscevaluatefarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolsisobandjquerylibjsonlitekableExtraknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemimeminqamitoolsmvtnormnumDerivpillarpkgconfigpracmaR6rappdirsrbenchmarkRColorBrewerRcppRcppArmadillorlangrmarkdownrstudioapiS7sassscalesstringistringrsurveysurvivalsvglitesystemfontstabtextshapingtibbletidyselecttinytexutf8vctrsviridisLitewithrxfunxml2yaml

Walking strides segmentation with adept
Raw accelerometry data sample | Running trial | Sensor and accelerometry data | Sensor location | Data set acc_running | Note on date_time column values | Accelerometry data visualization | Sub-second level accelerometry data | Note on sensors desynchronization | Vector magnitude | Vector magnitude count | Walking strides segmentation | Segmentation with Approach 1: use existing stride templates | Left ankle | Left hip | Results: estimated stride duration time | Results: subject-specific stride pattern (left ankle) | Correlation clustering of segmented walking strides | Segmentation with Approach 2: derive stride templates semi-manually | Deriving stride patterns in a semi-manual way: left ankle | Deriving stride patterns in a semi-manual way: left hip | Segmentation | References

Last update: 2021-01-31
Started: 2019-02-02

Introduction to adept package
Introduction | ADEPT method | Pattern template | Install and load adept package | Pattern segmentation with adept package | Examples 1: signal with no noise, same-length pattern | Simulate data | Example 1(a): segment pattern | segmentPattern output | Example 1(b): use pattern.dur.seq to modify a grid of pattern duration | Example 1(c): use x.fs to modify x time-series frequency | Examples 2: signal with no noise, pattern duration varies | Example 2(a): segment pattern | Example 2(b): use pattern.dur.seq to modify a grid of pattern duration | Example 2(c): use similarity.measure to modify similarity statistic | Examples 3: signal with no noise, pattern duration and pattern shape vary | Example 3(a): segment pattern | Example 3(b): use similarity.measure.thresh to modify the threshold of minimal similarity | Example 3(c): use multiple templates simultaneously | Examples 4: signal with noise, pattern duration and pattern shape vary | Example 4(a): segment pattern | Example 4(b): use x.adept.ma.W to smooth x for similarity matrix computation | Example 4(c): use fine-tune procedure for peak detection | Example 4(d): use fine-tune procedure and smooth signal for peak detection | References

Last update: 2019-06-16
Started: 2019-01-08